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(2) Srivastava, A., Timsina, R., Heo, S., Dewage, S. W., Kirmizialtin, S., and Qiu, X. (2020) Structure-guided DNA-DNA attraction mediated by divalent cations. bioRxiv.

(3) Srivastiva, A., Timsina, R., Dewage, S. W., Qiu, X., and Kirmizialtin, S. (2019) Sequence encoded DNA-DNA Interactions, in EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS, pp S91–S91. SPRINGER 233 SPRING ST, NEW YORK, NY 10013 USA.

(4) Srivastava, A., Timsina, R., Dewage, S. W., Qiu, X., and Kirmizialtin, S. (2019) Sequence Effects on Mg+2 Ion Mediated DNA – DNA Interactions. Biophys. J. 116, 360a.

(5) Shetty, D., Skorjanc, T., Raya, J., Sharma, S. K., Jahovic, I., Polychronopoulou, K., Asfari, Z., Han, D. S., Dewage, S., Olsen, J.-C., Jagannathan, R., Kirmizialtin, S., and Trabolsi, A. (2018) Calix[4]arene-Based Porous Organic Nanosheets. ACS Appl. Mater. Interfaces 10, 17359–17365.

(6) Zhao, L., Rathnayake, U. M., Dewage, S. W., Wood, W. N., Veltri, A. J., Cisneros, G. A., and Hendrickson, T. L. (2016) Characterization of tunnel mutants reveals a catalytic step in ammonia delivery by an aminoacyl-tRNA amidotransferase. FEBS Lett. 590, 3122–3132.

(7) Dewage, S. W. (2015) Classical and Ab Initio QM/MM Simulations of Bacterial Enzymes. Wayne State University.

(8) Dewage, S. W., and Cisneros, G. A. (2015) Computational Analysis of Ammonia Transfer Along Two Intramolecular Tunnels in Staphylococcus aureus Glutamine-Dependent Amidotransferase (GatCAB). J. Phys. Chem. B 119, 3669–3677.

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(10) Pratt, A. C., Dewage, S. W., Pang, A. H., Biswas, T., Barnard-Britson, S., Cisneros, G. A., and Tsodikov, O. V. (2015) Structural and computational dissection of the catalytic mechanism of the inorganic pyrophosphatase from Mycobacterium tuberculosis. J. Struct. Biol. 192, 76–87.

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